Job 13555879.pbspl1.nas.nasa.gov started on Wed May 25 08:51:22 PDT 2022 The job requested the following resources: ncpus=1 place=scatter:excl walltime=02:00:00 PBS set the following environment variables: FORT_BUFFERED = 1 TZ = PST8PDT On r15i5n8: Job 13555879.pbspl1.nas.nasa.gov started at Wed May 25 08:51:27 PDT 2022 on r15i5n8. The following modules are loaded: Currently Loaded Modulefiles: 1) pkgsrc/2021Q2 4) szip/2.1.1 2) comp-intel/2020.4.304 5) hdf5/1.8.18_mpt 3) mpi-hpe/mpt.2.23 /var/spool/pbs/mom_priv/jobs/13555879.pbspl1.nas.nasa.gov.SC: line 37: /home6/lrastaet/kaiju/scripts/setupEnvironment.sh: No such file or directory The active environment variables are: MPI_WATCHDOG_TIMER=720 MKLROOT=/nasa/intel/Compiler/2020.4.304/compilers_and_libraries_2020.4.304/linux/mkl MANPATH=/nasa/hdf5/1.8.18_mpt/share/man:/nasa/hpe/mpt/2.23_cent7/man:/nasa/hpe/mpt/2.23_cent7/usr/man:/nasa/intel/Compiler/2020.4.304/documentation_2020/en/man/common:/nasa/pkgsrc/toss3/2021Q2/man:/opt/c3/man:/opt/sgi/share/man:/usr/share/catman:/usr/share/man:/usr/catman:/usr/man KAIJU_QUICKSTART_DIR=/quickstart HOSTNAME=r15i5n8 MPI_SYSLOG_COPY=2 IPPROOT=/nasa/intel/Compiler/2020.4.304/compilers_and_libraries_2020.4.304/linux/ipp SHELL=/bin/bash TERM=dumb MPI_IB_FAILOVER=127 MPIO_LUSTRE_GCYC_MIN_ITER=1 PBS_JOBNAME=bw3d TMPDIR=/var/tmp/pbs.13555879.pbspl1.nas.nasa.gov LIBRARY_PATH=/nasa/hdf5/1.8.18_mpt/lib:/nasa/hpe/mpt/2.23_cent7/lib:/nasa/hpe/mpt/2.23_cent7/usr/lib64:/nasa/intel/Compiler/2020.4.304/compilers_and_libraries_2020.4.304/linux/ipp/lib/intel64:/nasa/intel/Compiler/2020.4.304/compilers_and_libraries_2020.4.304/linux/compiler/lib/intel64_lin:/nasa/intel/Compiler/2020.4.304/compilers_and_libraries_2020.4.304/linux/mkl/lib/intel64_lin:/nasa/intel/Compiler/2020.4.304/compilers_and_libraries_2020.4.304/linux/tbb/lib/intel64/gcc4.8:/nasa/intel/Compiler/2020.4.304/compilers_and_libraries_2020.4.304/linux/tbb/lib/intel64/gcc4.8:/nasa/intel/Compiler/2020.4.304/compilers_and_libraries_2020.4.304/linux/daal/lib/intel64_lin FPATH=/nasa/hdf5/1.8.18_mpt/include:/nasa/hpe/mpt/2.23_cent7/include:/nasa/hpe/mpt/2.23_cent7/usr/include PBS_ENVIRONMENT=PBS_BATCH PBS_O_TZ=PST8PDT PBS_O_WORKDIR=/home6/lrastaet/MODELS/GMplus/GAMERA/comp-intel-2018.3.22_mpi-sgi-mpt.2.15r20/kaiju/bw3d NCPUS=1 MPI_IB_RAILS=1+ RUNID=bw3d USER=lrastaet PBS_TASKNUM=1 LD_LIBRARY_PATH=/nasa/hdf5/1.8.18_mpt/lib:/nasa/szip/2.1.1/lib:/nasa/hpe/mpt/2.23_cent7/lib:/nasa/hpe/mpt/2.23_cent7/usr/lib64:/nasa/intel/Compiler/2020.4.304/compilers_and_libraries_2020.4.304/linux/compiler/lib/intel64_lin:/nasa/intel/Compiler/2020.4.304/compilers_and_libraries_2020.4.304/linux/ipp/lib/intel64:/nasa/intel/Compiler/2020.4.304/compilers_and_libraries_2020.4.304/linux/mkl/lib/intel64_lin:/nasa/intel/Compiler/2020.4.304/compilers_and_libraries_2020.4.304/linux/tbb/lib/intel64/gcc4.8:/nasa/intel/Compiler/2020.4.304/compilers_and_libraries_2020.4.304/linux/daal/lib/intel64_lin PSTLROOT=/nasa/intel/Compiler/2020.4.304/compilers_and_libraries_2020.4.304/linux/pstl PBS_O_HOME=/home6/lrastaet CPATH=/nasa/hdf5/1.8.18_mpt/include:/nasa/szip/2.1.1/include:/nasa/hpe/mpt/2.23_cent7/include:/nasa/hpe/mpt/2.23_cent7/usr/include:/nasa/intel/Compiler/2020.4.304/compilers_and_libraries_2020.4.304/linux/ipp/include:/nasa/intel/Compiler/2020.4.304/compilers_and_libraries_2020.4.304/linux/mkl/include:/nasa/intel/Compiler/2020.4.304/compilers_and_libraries_2020.4.304/linux/pstl/include:/nasa/intel/Compiler/2020.4.304/compilers_and_libraries_2020.4.304/linux/pstl/stdlib:/nasa/intel/Compiler/2020.4.304/compilers_and_libraries_2020.4.304/linux/tbb/include:/nasa/intel/Compiler/2020.4.304/compilers_and_libraries_2020.4.304/linux/tbb/include:/nasa/intel/Compiler/2020.4.304/compilers_and_libraries_2020.4.304/linux/daal/include OSCAR_HOME=/opt/oscar FORT_BUFFERED=1 MPT_VERSION=2.23_cent7 PBS_MOMPORT=15003 MPI_IB_TIMEOUT=20 PBS_O_QUEUE=normal NLSPATH=/nasa/intel/Compiler/2020.4.304/compilers_and_libraries_2020.4.304/linux/compiler/lib/intel64/locale/%l_%t/%N:/nasa/intel/Compiler/2020.4.304/compilers_and_libraries_2020.4.304/linux/mkl/lib/intel64_lin/locale/%l_%t/%N PATH=/quickstart/bw3d:/build_mpi/bin:/nasa/hdf5/1.8.18_mpt/bin:/nasa/hpe/mpt/2.23_cent7/bin:/nasa/hpe/mpt/2.23_cent7/usr/bin:/nasa/intel/Compiler/2020.4.304/compilers_and_libraries_2020.4.304/linux/bin/intel64:/nasa/intel/Compiler/2020.4.304/compilers_and_libraries_2020.4.304/linux/bin:/nasa/pkgsrc/toss3/2021Q2/bin:/nasa/pkgsrc/toss3/2021Q2/sbin:/home6/lrastaet/bin:./:/usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/PBS/bin:/usr/sbin:/opt/c3/bin:/opt/sgi/sbin:/opt/sgi/bin PBS_O_LOGNAME=lrastaet PBS_O_LANG=C PBS_JOBCOOKIE=2003A61A3AC1944F5F8C6EE500B6232A MPI_UD_RECV_MSGS=32768 TBBROOT=/nasa/intel/Compiler/2020.4.304/compilers_and_libraries_2020.4.304/linux/tbb PWD=/home6/lrastaet _LMFILES_=/nasa/modulefiles/pkgsrc/toss3/pkgsrc/2021Q2:/nasa/modulefiles/toss3/comp-intel/2020.4.304:/nasa/modulefiles/toss3/mpi-hpe/mpt.2.23:/nasa/modulefiles/toss3/szip/2.1.1:/nasa/modulefiles/toss3/hdf5/1.8.18_mpt LANG=C PBS_NODENUM=0 MODULEPATH=/usr/share/modules/modulefiles:/nasa/modulefiles/toss3:/nasa/modulefiles/spack/gcc-4.8:/nasa/modulefiles/pkgsrc/toss3 KAIJU_INSTALL_DIR=/home6/lrastaet/kaiju TZ=PST8PDT PBS_JOBDIR=/home6/lrastaet LOADEDMODULES=pkgsrc/2021Q2:comp-intel/2020.4.304:mpi-hpe/mpt.2.23:szip/2.1.1:hdf5/1.8.18_mpt MACHINE=pleiades MPI_UD_TIMEOUT=40 PBS_O_SHELL=/bin/bash C3_RSH=ssh -oConnectTimeout=10 -oForwardX11=no LM_LICENSE_FILE=28518@license2 DAALROOT=/nasa/intel/Compiler/2020.4.304/compilers_and_libraries_2020.4.304/linux/daal PBS_JOBID=13555879.pbspl1.nas.nasa.gov MPI_IB_RNR_TIMER=26 ENVIRONMENT=BATCH HOME=/home6/lrastaet SHLVL=2 PKGSRC_BASE=/nasa/pkgsrc/toss3/2021Q2 PBS_O_HOST=pfe24.nas.nasa.gov MPI_IB_RECV_MSGS=1024 MPI_ROOT=/nasa/hpe/mpt/2.23_cent7 LOGNAME=lrastaet CVS_RSH=ssh CLASSPATH=/nasa/intel/Compiler/2020.4.304/compilers_and_libraries_2020.4.304/linux/daal/lib/daal.jar PBS_QUEUE=normal MODULESHOME=/usr/share/Modules PKG_CONFIG_PATH=/nasa/intel/Compiler/2020.4.304/compilers_and_libraries_2020.4.304/linux/mkl/bin/pkgconfig PBS_O_MAIL=/var/mail/lrastaet OMP_NUM_THREADS=1 arch=intel64 MPI_TYPE_DEPTH=32 INFOPATH=/nasa/pkgsrc/toss3/2021Q2/info INCLUDE=/nasa/hdf5/1.8.18_mpt/include PBS_O_SYSTEM=Linux PBS_NODEFILE=/var/spool/pbs/aux/13555879.pbspl1.nas.nasa.gov PBS_O_PATH=/home6/lrastaet/bin:./:/usr/local/bin:/usr/local/sbin:/usr/bin:/bin:/usr/X11R6/bin:/PBS/bin:/usr/sbin:/sbin:/opt/c3/bin:/opt/sgi/sbin:/opt/sgi/bin BASH_FUNC_module()=() { eval `/usr/bin/modulecmd bash $*` } _=/usr/bin/printenv The current directory is /home6/lrastaet/MODELS/GMplus/GAMERA/comp-intel-2018.3.22_mpi-sgi-mpt.2.15r20/kaiju/bw3d. Running gamera_mpi.x on model bw3d. Job 13555879.pbspl1.nas.nasa.gov ended at Wed May 25 09:34:51 PDT 2022 on r15i5n8. ____________________________________________________________________ Job Resource Usage Summary for 13555879.pbspl1.nas.nasa.gov CPU Time Used : 05:45:54 Real Memory Used : 5113204kb Walltime Used : 00:43:25 Exit Status : 0 Number of CPUs Requested : 1 Walltime Requested : 02:00:00 Execution Queue : normal Charged To : s2157 Job Stopped : Wed May 25 09:34:54 2022 ____________________________________________________________________